Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIPLIGQLYRNNNVVTSIHGRGLINRSVIAIMKAHRFARHRMADDAELSVHETFPILKAMSELKLGAASVDLGKMVAKFKAEGNGRSIEDFVKAELAEVVGKQNGDAREGTDVVLYGFGRIGRLLARILIEKTGGGDGLRLRAIVVRKGAENDLVKRASLLRRDSVHGPFDGTITIDEENNTLTANGNLIQVIYSNDPASIDYTQYGIKNALLVDNTGKWRDAEGLGQHLKCPGIDRVVLTAPGKGALKNIVHGINHTDIGA-DDKIISAASCTTNAIVPVLKAVNDQYGIVNGHVETVHSYTNDQNLIDNFHK-GSRRGRSAPLNMVITETGAATAAAKALPVLKGKLTGNAIRVPTPNVSMAILNLNLEKATTREEINEYLRQMAMHSDLQKQIDFVSSQEVVSTDFVGSRHAGVVDAEATIC-NDNRVVLYVWYDNEFGYSCQVVRVMEDMAGVNPPAFPR |
| 3H9E Chain:O ((6-341)) | ------------------------------------------------------------------------------------------------------------RELTVGINGFGRIGRLVLRACMEK-----GVKVVAVNDPF---IDPEYMVYMFKYDSTHGRYKGSVEF--RNGQLVVDNHEISVYQCKEPKQIPWRAVGSP--YVVESTGVYLSIQAASDHISA-GAQRVVISAPSPD-APMFVMGVNENDYNPGSMNIVSNASCTTNCLAPLAKVIHERFGIVEGLMTTVHSYTATQKTVDGPSRKAWRDGRGAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVPTPDVSVVDLTCRLAQPAPYSAIKEAVKAAA-KGPMAGILAYTE-DEVVSTDFLGDTHSSIFDAKAGIALNDNFVKLISWYDNEYGYSHRVVDLLRYMFSRDAE---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3H9E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -204263 for 2961 contacts (-69.0/contact) +
2D Compatibility (PS) -36512 + (NN) -16815 + (LL) 8228
1D Compatibility (HY) -21200 + (ID) 6200
Total energy: -276762.0 ( -93.47 by residue)
QMean score : 0.508
|
|
|