Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIGHGYDVHRFGEGDFITLGGVRIPHKHGLVAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPRFKGADSRALLRHVVAIVAEKGWKVGNVDATIVAQAPKMAPHIETMRGLIAEDLGVAVDQVNVKATTTERLGFTGREEGIAVHAVALLMAR
1W55 Chain:A ((210-366))
IFTGNGFDVHEFGENRPLLLAGVQIHPTMGLKAHSDGDVLAHSLTDAILGAAGLGDIGELYPDTDMKFKNANSMELLKQAYDKVREIGFELINIDICVMAQSPKLKDFKQAMQSNIAHTLDLDEFRINVKATTTEKLGFIGRKEGMAVLSSVNLKYF
General information:
TITO was launched using:
RESULT:
Template:
1W55.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114826 for 1297 contacts (-88.5/contact) +
2D Compatibility (PS) -17391 + (NN) -12777 + (LL) 0
1D Compatibility (HY) -10800 + (ID) 3800
Total energy: -159594.0 ( -123.05 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_1W55.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W55-query.scw
PDB file :
Tito_Scwrl_1W55.pdb
: