Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKRVVIFGGTGFIGKHIVRRLATAGYLIRV--FVRNQEK--AACLKLCGNLGQISIFKGDFFDEKLILESVEECNVVINLVGILYEV----KEHSFYAVHVGIAEKIARAAKIKNVSMMIHFSAMGIENS-------------------------KLSEYAQSKLKGEKAVTA----AFPEAIIIKPSLVFGKEDNF---FTKFARLATILPFLPLIGSGTTKFQPICVTDLAEMVYRIINLNKQDKKIYNIGGPKIYSFKSLLKFILNVTNRKCLLVNVSFPMAKLIAFFLESRIISILLKPITGDISPMLTRDQVRVMMSSSIEK-STDFEAIKIRPL--SIENVVPEYLKVYKKY |
| 1OC2 Chain:A ((3-323)) | QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL-GDRVELVVGDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGR-MGETYLIGADGEKNNKEVLELILEKMGQPKDAY----------DHVT-D--------------RA--G------HDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OC2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205965 for 2331 contacts (-88.4/contact) +
2D Compatibility (PS) -29999 + (NN) -8382 + (LL) 3172
1D Compatibility (HY) 0 + (ID) 2350
Total energy: -243524.0 ( -104.47 by residue)
QMean score : 0.398
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