Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQHHKVAIIGAGAAGIGMAITLKDFGI-TDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTT-ETYHADYIFVATGDYNF-PKKP--F-KYGIHYSEIEDFDNF-----NKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDATKNPIVQQ-LFVTTNQDIKLTTHDESTRYPNIFMIGATVENDNAK-----LCYIYKFRARFAVLAHLLTQREGLPAKQEVIENYQKNQMYLDDYSCCEVSCTC |
| 3EF6 Chain:A ((3-310)) | ---THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYD---RPS--------LSKAVLD------------------GS-LERPPILAEA-DWYGEARIDMLTGPEVTALDVQT--RTISLDDGTTLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVL------GRRIGAWLRGLLTEL-GVQVELGTGVVGFSGEGQLEQVMASDGRSFVA-DSALICVGAEPADQL-ARQAGLACD-RGVIVDHCG-ATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGKN------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192279 for 2429 contacts (-79.2/contact) +
2D Compatibility (PS) -31811 + (NN) -13947 + (LL) 4532
1D Compatibility (HY) -10400 + (ID) 2150
Total energy: -246055.0 ( -101.30 by residue)
QMean score : 0.477
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