Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKKELSQYLLQSLNMGLGALMQGETSYTNSFDCKIMEEGFLFLPRLPAGYIIDDELYQKIFLIANASLFPRYTLLKQNSAYFMALDTEDIHVQRGLFFPWKEGVSERLIISDLEDFASSQKETLIPIMKNLSLDFNKVNHIAIAGNSGSGKSYALTYFLSLLKGIS
3GFO Chain:A ((6-61))
------------------------------------------------------------------------------------------------------------YILK-VEELNYNYSD-GTHALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNGILKPSS
General information:
TITO was launched using:
RESULT:
Template:
3GFO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27614 for 294 contacts (-93.9/contact) +
2D Compatibility (PS) -5498 + (NN) 2637 + (LL) 8104
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -25021.0 ( -85.11 by residue)
QMean score : 0.296
(partial model without unconserved sides chains):
PDB file :
Tito_3GFO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GFO-query.scw
PDB file :
Tito_Scwrl_3GFO.pdb
: