Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVLRSLASPAALTDPKRCASVVGVAAFAVRREHAPDALGGPPGL-PAPRGFRAAFAAAYAVAYLA-----GGERRMLRLIRRYGPIMTMPILSLGDVAIVSDSALAKEVFTAPTDVLLGG--EGVGPAAAIY-GSGSMFVQEEPEHLRRRKLLTPPL-HGAALDRYVPIIENSTRAAMHTWPV-----DRPFAMLTVARSLMLDVIVKVIFGVDDPEE----VR---RLGRPFERLLNLGVSEQLTVRYALRRLGALRVWPARARANTEIDDVVMALIAQRRADPRLGERHDVLSLLVSARGESGEQLSDSEIRDDLITLVLAGHETTATTLAWAFDLLLHHPDALRRVRAEAVGG-------------GEAFTTAVINETLRVRPPAPLTARVAAQPLTIGGYRVEAGTRIVVHIIAINRSAEVYEHPHEFRPERFLGTRP--QTYAWVPFGGGVKRCLGANFSMRELITVLHVLLREGEFTAVDDEPERIVRRSIMLVPRRGTRVRFRPAR |
| 3K9V Chain:A ((23-482)) | -------------------------------------VTDLPGPTNWPLLGSLLE-------IFWKGGLKKQHDTLAEYHKKYGQIFRMKL-GSFDSVHLGSPSLLEALYRTESAHPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGKMMVTPVELHKRLN-TKVWQAHTLAWDTIFKSVKPCIDNRLQRYSQQPGADFLCDIYQQ-----DHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKKINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEP-VEMLHLGILVPSRELPIAFRPR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K9V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203050 for 3337 contacts (-60.8/contact) +
2D Compatibility (PS) -45899 + (NN) -21747 + (LL) 4376
1D Compatibility (HY) -16000 + (ID) 4500
Total energy: -286820.0 ( -85.95 by residue)
QMean score : 0.419
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