Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ-MPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEEMES
3ZDU Chain:A ((3-289))---------------------EMYETLGKVGEGSYGTVMKCKHKNTGQIVAIKIFY--------NKIAMREIKFLKQFHHENLVNLIEVFRQK------KKIHLVFEFIDHTVLDELQHYCHGLESKRLRKYLFQILRAIDYLHSNNIIHRDIKPENILVSQSGITKLCDFGFART--DIYDDEVATRWYRAPELVLKDTSYGKPVDIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLSPHLQNIFSKSPIFAGV-VLPQVQHPKNARKKYPKLNGLLADIVHACLQIDPADRISSSDLLHHEYFTR--------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3ZDU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -180073 for 2166 contacts (-83.1/contact) +
2D Compatibility (PS) -29009 + (NN) -8442 + (LL) 5312
1D Compatibility (HY) -25200 + (ID) 4800
Total energy: -242212.0 ( -111.82 by residue)
QMean score : 0.550

(partial model without unconserved sides chains):
PDB file : Tito_3ZDU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ZDU-query.scw
PDB file : Tito_Scwrl_3ZDU.pdb: