Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MCDLIEPQPAEKIGKMKKLRRTLSESFSRIALKKDDTTFDEICVTKMSTRNCQGMDSVIKPLDTIPEDKKVRVQRTQSTFDPFEKPANQVKRVHSENNACINFKTSSTGKESPKVRRHSSPSSPTSPKFGKADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPDNVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSSKNLRQAWNKLSYVNHAEDLASKLLQCSPKNRLSAQAALSHEYFSDLPPRLWELTDMSSIFTVPNVRLQPEAGESMRAFGKNNSYGKSLSNSKH |
| 3NIZ Chain:A ((15-311)) | ------------------------------------------------------------------------------------------------------------------------------YFQGLMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIR-----GIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR---HEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD-DDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIP--GFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDPQI------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3NIZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -166985 for 2274 contacts (-73.4/contact) +
2D Compatibility (PS) -30568 + (NN) -11114 + (LL) 9840
1D Compatibility (HY) -33200 + (ID) 7550
Total energy: -239577.0 ( -105.35 by residue)
QMean score : 0.551
|
|
|