Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRSISCSKEYAEDVRNLNIRPEQLDDFFGQKDLIQNLKVFINAAKTR-------TEALDHVLLHGPPGLGKTTLAQIISKELRVSFRATSGPLLNK------AGDLAAVLTT--LNAKDVLFIDEIHRLNRS-----IEEVLYTAMEDFCLDLLVGEGPSTRTLRIDLPPFTLVGATTRLGLLSAPLRDRFGIPLRLEFYSFEELVDIIKRGTKVFSAEIEEDAIQEIACRARGTPR-IALRLLRRIRDFVEVKDNKKITHKIADSALSKLGIDKMGLNKLDVDYLRFLFNTSGSVGIDTISIALSEDSGNIEETVEPYLVKISFVKRTPRGRVLTDQGKEYLSLQY |
3D8B Chain:A ((73-305)) | -------------EIMDHGPPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLRGPPKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQESSRRIKTEFLVQLDG------------------SEDRILVVGATNRPQEIDEAARRRLVKRLYIPLPEASARKQIVINLMSKEQCCLSEEEIEQIVQQSDAFSGADMTQLCREASLGPIRSLQTVRPIAYIDFENAFRTVRPSVSPKDLELYENWNKTFGCGK--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D8B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114360 for 1529 contacts (-74.8/contact) +
2D Compatibility (PS) -21763 + (NN) -6850 + (LL) 5020
1D Compatibility (HY) -4400 + (ID) 2050
Total energy: -144403.0 ( -94.44 by residue)
QMean score : 0.411
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