Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRIQRNKIKVEIKKLSHGKDLPLPCYATMQSAGMDLYAALGNSIVLNPLERLLIPTGIVIVIPNGFEGQIRPRSGLAAKYGITVLNSPGTIDSDYRGEVKVCLINLSNQPYEIKRGDRIAQILIAPVFRVIWDDAERLCTEETERSAGGFGSSGR
3ARA Chain:A ((24-148))
--------MQLRFARL--SEHATAPTRGSARAAGYDLYSAYD--YTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAA-KHF-IDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQAL-----------------
General information:
TITO was launched using:
RESULT:
Template:
3ARA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79430 for 838 contacts (-94.8/contact) +
2D Compatibility (PS) -13521 + (NN) -5607 + (LL) 744
1D Compatibility (HY) -10400 + (ID) 2200
Total energy: -110414.0 ( -131.76 by residue)
QMean score : 0.373
(partial model without unconserved sides chains):
PDB file :
Tito_3ARA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ARA-query.scw
PDB file :
Tito_Scwrl_3ARA.pdb
: