Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAK-----------NGYYDGITFHRVINDFMIQGGDPT-ATGMGGESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE
2HE9 Chain:A ((29-190))
-------------------NREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAP----------------------------HLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVIDCGVLA
General information:
TITO was launched using:
RESULT:
Template:
2HE9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39985 for 1095 contacts (-36.5/contact) +
2D Compatibility (PS) -15721 + (NN) -5413 + (LL) 2016
1D Compatibility (HY) -9600 + (ID) 3300
Total energy: -72003.0 ( -65.76 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_2HE9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HE9-query.scw
PDB file :
Tito_Scwrl_2HE9.pdb
: