Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKSVAIIGAGITGLSSAYFLKQQDPNIDVTIFEASNRPGGKIQSYRKDGYMIELGPESYLGRKTIMTELAKDIGLEQDIVTNTT--GQS-YIFAKNKLYPIPGGS-IMGIPTDIKPFVTT---KLISPLGK-----LRAGLDLIKKPIQMQDGDISVGAFFRARLG--NEVLENLIEPLMGGIYGTDIDKLSLMSTFPNFKEKEEAFGSLIKGMKDEKNKRLKQRQLYPGAPKGQFKQFKHGLSSFIEALEQDVKNKGV-TIRYNTSVDDIITSQKQYKIVYSNQQEDVFDGVLVTTPHQVFLNWF-GQD-P-AF-DYFKTMDSTTVATVVLAFDEKDIENTYDGTGFVIARTSDTDITACTWTSKKWPFTTPEGKVLIRAYVGKPGDTVVDDHTDNELVSIVRRDLSQMMTFKGDPEFTIVNRLPK------SMPQYHVGHIQQIRQIQAHIKQTYPRLRVTGASFE---AVGLPDCITQGKVAAEEVIAEL |
| 2VVM Chain:A ((39-485)) | -PWDVIVIGGGYCGLTATRDLTVA--GFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHWHQSHVWREITRYKMHNALSPSFNFSRGVNHFQLRT----NPTTSTYMTHE-AEDELLRSALHKFTNVDGTNGRTVLPFPHDMFYVPEFRKYDEMSYSERIDQIRDELSLNERSSLEAFILLCSGGTLENSSFGEFLHWWAMS---GYT-YQGC----M------------DCLMSYKFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVLSTIQFSPALSTERISAMQAGHVSMCTKVHAEVDNKDMRS-WT--GIAYPF------NKLCYAI--GDGTTPAGNTHLVCFGNS--ANHI--QPDED-VRETLKAVGQLAPGTFGVKRLVFHNWVKDEFAKGAWFFSRPGMVSE---CLQGLREKHGGVVFANSDWALGWRSFIDGAIEEGTRAARVVLEEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VVM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173315 for 3703 contacts (-46.8/contact) +
2D Compatibility (PS) -44734 + (NN) -15549 + (LL) 2088
1D Compatibility (HY) -9200 + (ID) 3250
Total energy: -243960.0 ( -65.88 by residue)
QMean score : 0.407
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