Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKPIKTYDIKEEELAKTAYATIKTNKGNITLELFYKDAPQAVSNFVTLAKEGFYNGLNFHRVIAGFVAQGGCPYGTGTGGP---EHRIKCEVAHNPNKHQ-RGSISMAHAGRDTGGSQFFLCFVDLPHLDGEHTVFGKITSAESLSVLDKIKQGDIIE--SVVFSPSL
2A2N Chain:A ((21-168))
----------------SDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFH-STLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKG--MEVVQRISNVKVNPKTDKPYEDVS
General information:
TITO was launched using:
RESULT:
Template:
2A2N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76692 for 1080 contacts (-71.0/contact) +
2D Compatibility (PS) -15308 + (NN) -7200 + (LL) 1552
1D Compatibility (HY) -8000 + (ID) 2700
Total energy: -108348.0 ( -100.32 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_2A2N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A2N-query.scw
PDB file :
Tito_Scwrl_2A2N.pdb
: