Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIRKIAIAALSVVVAGSLLTACGGGNSKSDDNGKTKVTFWAAPNPTQVKYWDEMAKAYEKENPDVTIEVSQMKESPSSEATIQSAIASKTAPTMSENINRSFAAQLADSKA-IVPLNDVKGLDDVVKERNMSETMDSWKFSDGNQYVLPVYSNPILFAWRLDTLKELGYDAPPKTYSEALEVGKKLKAKYPDKVLWAKGDLSDPTAWMRWFDFFPLYDAASKGNAFVED-GKLVADDKAGTELLTFMSELQKNKLLLASK-----------ATDPFETGTSIMADNGPWTFPNWDEKFPELKYNENYAITAPLVPDSMVNEENVATYADSKGVVMYAQATDKEKEAAMDFLKFVYNDDKNDLKFLETTNLIPARDDATENETFTAFF-KENPELEVYAANVPYSIPAMDDAKY--NDIQQIIGEEAWNPIVRGEKKPTKAWSDMKKAEDGVLQE |
| 2UVJ Chain:A ((5-404)) | ----------------------------------EVNLRMSWWGGNGRHQVTLKALEEFHKQHPNINVKAEYTGW-DGHLSRLTTQIAGGTEPDVMQ-TNWNWLPIFSKDGTGFYNLFSVKEQ--LDLAQFDPKELQQTTV-NGKLNGIPISVTARIFYFNDATWAKAGLE-YPKTWDELLAAGKVFKEKLGD-QYYPVVLEHQD-TLAL---IRSYMTQKYNIPTIDEANKKFAYSPEQWVEFFTMYKTMVDNHVMPSTKYYASFGKSNMYEMKPWINGEWAGTYMWNSTITKYSDNL-TKP--AKLVLGPYPMLPGAK--DAGLFFKPAQMLSIGKSTKH--PQESAMLINFLLNSKEGVEALGLE-RGVPLSATAVTQLRASGVIKDEDPSVAGLNMALELPHKMTTSPYFDDPQIVSLFGD-AIQYIDYGQKTVQETAEYFNKQGDRILK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2UVJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56959 for 3251 contacts (-17.5/contact) +
2D Compatibility (PS) -40489 + (NN) -10616 + (LL) 2268
1D Compatibility (HY) -12400 + (ID) 2450
Total energy: -120646.0 ( -37.11 by residue)
QMean score : 0.454
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