Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKIVFFDVDGTLVGETKEIPASAKQAIAKLKENGVYVAIATGRGPFMLDEIRKELDINSYICYNGQYVIFEGKEIYAKPLPTESLERLITVASEHEHPIVFSGKDSMRANLPDHDRVTIGMNSIKR-EYPKVDANYYKGRDIYQCLLFCDES-YDAYYREEFKQYGFLRWHDVS-VDVCPADGSKAEGIKQMIKKLGFSMKDTYAFGDGLNDIAMLQTVGTGVAMGNGRDEVKAVADYVTSHVDDDGVYNALKQLKLI |
| 2PQ0 Chain:A ((2-257)) | GRKIVFFDIDGTLLDEQKQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNVLYKQPLRREKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLY-YENKDIYQALLFCRAEEEEP-YVRNYPEFRFV-RWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLKQLQLI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PQ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10755 for 1965 contacts (5.5/contact) +
2D Compatibility (PS) -25921 + (NN) -4749 + (LL) 284
1D Compatibility (HY) 4800 + (ID) 2050
Total energy: -16881.0 ( -8.59 by residue)
QMean score : 0.249
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