Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDERIISSETVDAEEVSFETSLRPQNL-SQYIGQDKVKNNLTVFIEAATLRNEALDHVLLYGPPGLGKTTLAMVIASEMGSQ--IKTTSGPAI-----ER---------------------------------P----GDLATILTSL-----EPGDVLFIDEIHRLSRAIEEILYPAMEDYCLDIVIGTGPTARSVRLDLPPFTLIGATTR-----------AGLLSAPLRDRFGVIDHLEFYTEEQLTEIVLRTSNILDTKIDDLGAREIARRS-RGTPRIANRLLKRVRDFAQVRGNGTVTEKLAKEALTLLQVD---PRGLDTIDQKLLHTIIQSFRGGPVGLDTIAASIGEERETIEDMQEPYLLQIGFLQRTPRGRIVTETAYNHLGISYEKEV |
| 3UK6 Chain:A ((28-341)) | ------------IRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRITVSLHEIDVINSFLALFKSEVREQINAKVAEWREEGK-IPGVLFIDEVHMLDIESFSFLNRALESDM------------------APVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLI-VSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UK6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88033 for 1718 contacts (-51.2/contact) +
2D Compatibility (PS) -24864 + (NN) -10000 + (LL) 7692
1D Compatibility (HY) -10800 + (ID) 2400
Total energy: -128405.0 ( -74.74 by residue)
QMean score : 0.479
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