Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEKNAYAKSGVDVEAGYEVVERI-KKHVARTERAGVMGAL--GGFGGMFDLSQTGVKEPVLISGTDGVGTKLMLAIKYDKHDTIGQDCVAMCVNDIIAAGAEPLYFLDYVATGK--NEPAKLEQVVAGVAEGCVQAGAALIGGETAEMPGMYGEDDYDLAGFAVGVAEKSQIIDGSKVKEGDILLGLASSGIHSNGYSLVRRVFADYTGDEVLPELEGKQLKDVLLEPTRIYVKAALPLIKEELVNGIAHITGGGFIENVPRMFAD-DLAAEIDEDKVPVLPIFKALEKYGDIKHE--------------------EMFEIFNMGVGLMLAVSPENVNRVKELL---DEPVYEIGRIIKKADASVVIK |
| 3U0O Chain:A ((29-345)) | -----------------------ILHSEQAKFVDPNLLVGNETRDDAAVYDLGN----GTSVISTTDFFMP------IVDNPFDFGRIAATNAISDIFAMGGKPIMAIAILGWPINKLSPEIAREVTEGGRYACRQAGIALAGGHSIDAPE------PIFGLAVTGIVPTERVKKNSTAQAGCKLFLTKPLGIGVLTTAE-KKSLL--------KPEHQG-LATEVMCRMNIAG---ASFANIEGVKAMTDVTGFGLLGHLSEMCQGAGVQARVDYEAIPKLPGVEEYIKLGAVPGGTERNFASYGHLMGEMPREVRDLLCDPQTSGGLLLAVMPEAENEVKATAAEFGIELTAIGELVPARGGRAMVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141430 for 2497 contacts (-56.6/contact) +
2D Compatibility (PS) -29828 + (NN) -1519 + (LL) 3824
1D Compatibility (HY) -8000 + (ID) 3000
Total energy: -179953.0 ( -72.07 by residue)
QMean score : 0.351
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