Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MLTLFTHINSFVWGPPLLALLVGTGIYLSFRLGFIQLRQLSRAFKLIFREDNGQGDISSYAALATALAATVGTGNIVGVATAIKSGGPGALFWMWVAAFFGMATKYAEGLLAIKYRTKDTNGEISGGPMYYIVNGMGQKWKPLAVFFSAAGILVALLGIGTFTQVNAIASALEHTFKISTRFTSLILAVIVLFIIFGGIKSISKVSEKIVPFMAISYILATLIIIAVNYNKIPHTFQLIFSGAFSGTAAIGGFSGAIVKEAIQKGIARGVFSNESGLGSAPIAAAAAKTKEPVEQGLISMTGTFIDTIVICTLTGIAILVTGKWLEFDLQGAPLTQASFNTVFGSLGSFALTFCLVLFAFTTILGWSYYGERCFEYLFGTKFINAYRIIFVIMVGLGGFLQLDLIWVIADIVNGLMALPNLIALLVLSPIIVKETQKYFSETKNITKP |
| 4LCT Chain:A ((1-318)) | EPLDIEAYAALYK-GRTKIMRLLFIANHCGG-----NHALQFDALRMAYDEIKKGENTQLFREVVNKIGNR--------------LGEKYGMDLAWCEAVDRRAEQKKVKLENELSSYRTNL----------IKESIRMGYNDFGDFYYACG---------MLGDAFKNYIRTRDYCTTTKHIIHMCMNAILVSIEMGQFTHVTSYVNKAEQ--------------------NPETLEPMVNAKLRCASGLAHLELKKYKLAARKFL-------------------------DVNPELGNSYNEVIAPQDIATYGGLCALAS-------FDRSELKQKVIDN----------------INFRNFLELVPDVRELINDFYSSR----YASCLEYLASLKSNLLLDIHL-------------HDHVDTLYDQIRKKALIQYTLP------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LCT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -261842 for 2529 contacts (-103.5/contact) +
2D Compatibility (PS) -32455 + (NN) -2144 + (LL) 9720
1D Compatibility (HY) -9200 + (ID) 2100
Total energy: -298021.0 ( -117.84 by residue)
QMean score : 0.242
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