Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIIYLGLACVSILTLSGCESIERSLKGDRYVDQKLAENSSKEATEQLNKKTKQALKADKKAFPQLDKAVAKNEAQVLIKTSKGDINIKLFPKYAPLAVENFLTHAKEGYYNGLSFHRVIKDFMIQSGDPNGDGTGGKSIWNSKDKKKDSGNGFVNEISPYLYNI-RGSLAMANAGADTNGSQFFINQSQQDHSKQLSDKKVPKVIIKAYSEGGNPSLDGGYTVFGQVISGMETVDKIASVEVTK-SDQPKEKITITSIKVIKDYKFK |
1ZKC Chain:A ((16-178)) | -----------------------------------------------------------------------PRGSGYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWG---------KPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRS--C----------------------AYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVFVDPYEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58774 for 1287 contacts (-45.7/contact) +
2D Compatibility (PS) -17183 + (NN) -6212 + (LL) 6400
1D Compatibility (HY) -10400 + (ID) 3300
Total energy: -89469.0 ( -69.52 by residue)
QMean score : 0.550
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