Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDKKKILVTGIVPKEGLRKLM-DRFDVTYSEDRPFSRDYVLEHLSEYDGWLL-MGQKGDKEMIDAGENLQIISLNAVGFDHVDTAYAKEKGIIVSNSPQAVRVPTAEMTFALILAASKRLAFYDSIVRSGEWIDPSEQRYQGLTLQGSTLGIYGMGRIGLTVANFAKAFGMTVVYNDVYRLPEDKEKELGVTYLEFDQLIKTADVITIHAPALPSTIHKFNKDVFAKMKNRSYLINAARGPIVSEEALIEALKEGEIAGAGLDVFENEPQV-SEGLRSLDNVIMSPHAGTGTIEGRRTLAEEAADNIIAFFDGKPQNIVNK |
| 1WWK Chain:A ((4-307)) | ---MKVLVAAPLHEKAIQVLKDAGLEVIYEE--YPDEDRLVELVKDVEAIIVRSKPKVTRRVIESAPKLKVIARAGVGLDNIDVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKE---AMGIELEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNEERAK-EVNGKFVDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNVVLTPHIGASTVEAQERAGVEVAEKVVKILKG-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WWK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172928 for 2537 contacts (-68.2/contact) +
2D Compatibility (PS) -33352 + (NN) -18333 + (LL) 952
1D Compatibility (HY) -26800 + (ID) 5450
Total energy: -255911.0 ( -100.87 by residue)
QMean score : 0.602
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