Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGTVNITVSDGVRYAVADEGPNASEAVVCLHGFTGSKQSWT-FLDEMLPDSRLIKIDCLGHGETDAPLNGKRYSTTRQVSDLAEIFDQLKLHKVKLIGYSMGGRLAYSFAMTYPERVSALVLESTTPGLKTLGERRERIMRDRKLADFILRDGLEAFVAYWENIPLFSSQQRLAEDIRYRIRSGRLRNNKIGLANSLTGMGTGSQPSLWSRVEEIDVPVLLICGEWDEKFC-AIN-QEVHKMLPSSRIEIVPKAGHTVHVEQPRLFGKIVSEFLTSI
4CCY Chain:A ((36-293))----YVSTR-FGKTHIIASGPKDAPSLILLHGGLFSSAMWYPNIAAWSSQFRTYAVDIIGDKNKSIPSA-AMETRADFAEWMKDVFDSLGLETAHLAGLSLGGSHIVNFLLRAPERVERAVVISPAEAFISFHPDVYKYA-----AELTGARGAESYIK-WITGDSYD---LHPLLQRQIVAGVEWQDEQRSLKPTENGF---PYVFTDQELKSIQVPVLLMFGEHEAMYHQQMAFERASVLVPGIQAEIVKNAGHLLSLEQPEYVNQRVLSFLCG-


General information:
TITO was launched using:
RESULT:

Template: 4CCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1478 -55144 -37.31 -216.25
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -37.31
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.441

(partial model without unconserved sides chains):
PDB file : Tito_4CCY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CCY-query.scw
PDB file : Tito_Scwrl_4CCY.pdb: