Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTSRGDSREKILHTASRLFQLQGYHATGLNQIVKESGAPKGSLYHFFPNGKEELAIEAVTYTGKIVEHLIQQSMDESSDPVEAIQLFIKKTASQFDNTESIKGIPVGLLASETALISEPLRTVCMKVFKSWEAVFARKLMEN----GF-AEEEANQLGTLINSMIEGGIMLSLTNKDKTPLLLIAEQIPVLVRKKG
3QBM Chain:A ((2-191))MRKGQETRERVVAQAAALFNVSGYAGTAISDIMAATGLEKGGIYRHFE-SKEQLALAAFDYAAEKVRERFAVGLAGHKHTVDTIIAFLDVFRSYAERPPLVGGCPILNTAIESDDTNPMLRERVRAVIDEWRETIRTLVQTGIARGEIRPEVDADRLALLIIATMEGAVMLARILETATPLEHAYTHLATY-----


General information:
TITO was launched using:
RESULT:

Template: 3QBM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 713 -62750 -88.01 -339.19
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -88.01
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.539

(partial model without unconserved sides chains):
PDB file : Tito_3QBM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QBM-query.scw
PDB file : Tito_Scwrl_3QBM.pdb: