Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----MTALSKSKEIIDQTSHYGANNYHPLPIVISEALGAWVKDPEGNEYMDMLSAYSAVNQGHRHPKIIQALKDQADKITLTSRAFHNDQLGPFYEKTAKLTGKEM-----ILPMNTGAEAVESAVKAARRWAYEVKG--VADNQAEIIACVGNFHGRTMLAVSLSS-EEEYKRGFGPMLPGIKLIPYGDVEALRQAITP-NTAAFLFEPIQGEAGIVIPPEGFLQEAAAICKEENVLFIADEIQTGLGRTGKTFACDWDGIVPDMYILGKALGGGVFPISCIAADREILGVFNPGS--HGSTFGGNPLACAVSIASLEVLEDEKLADRSLELGEYFKSELESIDSPVIKEVRGRGLFIGVEL----TEAARPYCERLKEEGLLCKET-HDTVIRFAPPLIISKEDLDWAIEKIKHVLRNA
2OAT Chain:A ((36-439))GPPTSD--DIFEREYKYGAHNY-----HPLPVALERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALK-SQVDKL--TLTSRA-FYNNVLGEYEE-YITKLFNYHKVLPMNTGVEAGETACKLARKWGYTVKGIQ--KYKAKIVFAAGNFWGRTLSAISSSTDPTS-YDGFGPFMPGFDIIPYNDLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKP--GEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLPSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTH-GDIIRFAPPLVIKEDELRESIEIINKTILSF


General information:
TITO was launched using:
RESULT:

Template: 2OAT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2126 39799 18.72 103.91
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : 18.72
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.620

(partial model without unconserved sides chains):
PDB file : Tito_2OAT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OAT-query.scw
PDB file : Tito_Scwrl_2OAT.pdb: