Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAPTDRRVRADAARNRARVLEVAYQTFAADGL-SVPVDEIARRAGVGAGTVYRHFPTKEALFQAVIADRMHRIIDKGHALLKSKHPGDALFAFLRSMVLQWGATDRGLVEALAGVGIEISSAAPEAEADFLDLLTDLLRAAQRAGTVRPDVDVLEVKTLLVGCQAMQS--YNAELAAKVTDVALDGLRANRK
2Q24 Chain:A ((16-188))
--------------NRDKILAAAVRVFSEEGLDA-HLERIAREAGVGSGTLYRNFPTREALIEAAYRNEVARLCDSVPGLLAELPPAEALRAWTRRFIDY-ATAKLGMADALRAVVASGGDPYGDSRQLIQSALTALMDAAAAAGEIRSDIRSTDMFAALAGIALTSSRPDQRAQAERLLDLVLDGLRP---
General information:
TITO was launched using:
RESULT:
Template:
2Q24.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101241 for 1296 contacts (-78.1/contact) +
2D Compatibility (PS) -18846 + (NN) -15379 + (LL) 1568
1D Compatibility (HY) -8800 + (ID) 2850
Total energy: -145548.0 ( -112.31 by residue)
QMean score : 0.606
(partial model without unconserved sides chains):
PDB file :
Tito_2Q24.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q24-query.scw
PDB file :
Tito_Scwrl_2Q24.pdb
: