Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRPLARLRGRRVVPQRSAGELDAMAAAGAVVAAALRAIRAAAAPGTSSLSLDEIAESVIRESGATPSFLGYHGYPASICASINDRVVHGIPSTAEVLAPGDLVSIDCGAVLDGWHGDAAITFGVGALSDADEALSEATRESLQAGIAAMVVGNRLTDVAHAIETGTRAAELRYGRSFGIVAGYGGHGIGRQMHMDPFLPNEGAPGRGPLLAAGSVLAIEPMLTLGTTKTVVLDDKWTVTTADGSRAAHWEHTVAVTDDGPRILTLG
1O0X Chain:A ((6-254))
-----------MIRIKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATCVSVNEEVVHGLPLKEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETVES------VGFNVIRDYVGHGVGRELHEDPQIPNYGTPGTGVVLRKGMTLAIEPMVSEGDWRVVVKEDGWTAVTVDGSRCAHFEHTILITENGAEILTKE
General information:
TITO was launched using:
RESULT:
Template:
1O0X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138783 for 2282 contacts (-60.8/contact) +
2D Compatibility (PS) -27400 + (NN) -13012 + (LL) 1336
1D Compatibility (HY) -18800 + (ID) 5050
Total energy: -201709.0 ( -88.39 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_1O0X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O0X-query.scw
PDB file :
Tito_Scwrl_1O0X.pdb
: