Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTAAGLSGIDLTDLDNFAD--GFPHHLFAIHRREAPVYWHRPT--EHTPDGEGFWSVATYAETLEVLRDPVTYSSVTGGQRRFG-GTVLQDLPVAGQVLNMMDDPRHTRIRRLVSSGLTPRMIRRVEDDLRRRARGLLDGVEP---GAPFDFVVEIAAELPMQMICILLGVPETDRHWLFEAVEPGFDFRGSRRATMPRLNVEDAGSRLYTYALELIAGKRAEPADDMLSVVANATIDDPDAPALSDAELYLFFHLLFSAGAETTRNSIAGGLLALAENPDQLQTLRSDFE-LLPTAIEEIVRWTSPSPSKRRTASRAVSLGGQPIEAGQKVVVWEGSANRDPSVFDRADEFDITRKPNPHLGFGQ-GVHYCLGANLARLELRVLFEELLSRFGSVRVVEPAEWTRSNRHTGIRHLVVELRGG |
| 2WM5 Chain:A ((30-434)) | --------DIELGSLDFWALDDDVRDGAFATLRREAPISFWPTIEL---VAGNGHWALTKYDDVFYASRHPDIFSSYP-NI-TINDQT--PELAEYFGSMIVLDDPRHQRLRSIVSRAFTPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDMMGIPKADHQRIFHWTNVILGFGDPDL-ATDFDEFMQVSADIGAYATALAEDRRVNHHDDLTSSLVEAEVDG---ERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDGLAPTAVEEIVRWASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARNPNPHLGFGGGGAHFCLGANLARREIRVAFDELRRQMPDVVATEEPARLLSQFIHGIKTLPVTW--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192031 for 3288 contacts (-58.4/contact) +
2D Compatibility (PS) -42586 + (NN) -24461 + (LL) 900
1D Compatibility (HY) -24000 + (ID) 7450
Total energy: -289628.0 ( -88.09 by residue)
QMean score : 0.503
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