Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNPYPNLLSPLDLGFTTLRNRVVMGSMHTGLEDRARHIDRLADYFAERARGGVGLIITGGYAPNRTGWLLPF-ASELVTSAQARRHRRITRAVHDSGAKILLQILHAGRYAYH------PLAVSASPI-KAPITPFRPRALSARGVEATIADFARCAQLARDAGYDGVEIMGSEGY-LLNQFLAPRTNKRTDSWGGTPANRRRFPVEIIRRSRAAVGCDFIICYRLSMADYVAEGQSWDEIVALATEVEGAGATIINSGFGWHEARVPTIVTSVPGGAFVDISSAVAEHVTIPVVASNRINMPQAAERILAETQVRLISMARPMLSDPDWVLKAQSNRVDEINTCISCNQACLDHAFARKTVSCLLNPRAGRETQLVLSPTR-----RARSVAVVGAGPAGLATAANAAQRGHRVTLFEANDFIGGQFDMARRIPGKEEFSETIRYFSTILAK-HGVEVRLGTRVAAQELT--GYDEVVLATGVAPRIP--------AIPGIDHPMVLTYAEAITGVRPVGRTVAVVGAGG--IGFDVTELLVTDSSPTLNLKEWKAEWGVADPREARGALTTPLPAPPAREVYLLQRTKGPQGKRLGKTT-GWVHRASLKAKGVHQLSGVNYEQINDDGLHISFGPKRRRPQLLAVDNVVVCAGQEPVRDLESELRRHGINP-----HIIGGAAVAAELDAKRAIKQGTELAARL-------------------- |
3K30 Chain:A ((7-690)) | VAAPYDVLFEPVQIGPFTTKNRFYQVPHCNGMGYR--DPSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIADAIHEGGGLAGIELAHNGMNAPNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEEIDGGITREDIEGVLREL-GELPDLWDFAMGSWEGDSVT-SRFAPEGRQEEFVAGLKKLTTKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLPNKIRDGRLNLIRECIGCN-ICVSGDLTMSPIRCTQNPSMGEEWRRGWHPERIRAKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRESPMTGDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKG----------------------------------YEVSIVTP-GAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASI-ERELECDAVVMVTARLPREELYLDLVARRDAGEIASVRGIGDAW--APGTIAAAVWSGRRAAEEFDAVLPSNDEVPFRREVTQLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K30.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -329926 for 5876 contacts (-56.1/contact) +
2D Compatibility (PS) -69305 + (NN) -31862 + (LL) 2660
1D Compatibility (HY) -20400 + (ID) 8000
Total energy: -456833.0 ( -77.75 by residue)
QMean score : 0.471
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