Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGASTTTATMRQRWQAVMMNNYGT--PPIALASGDGAVVTDVDGRTYIDLLGGIAVNVLGHRHPAVIEAVTRQMSTLGHTSNL---YATEPGIALAEELVALLGADQRTRVFFCNSGAEANEAAFKLSRLTGR---------TKLVAAHDAFHGRTMGSLALTGQPA-KQTPFAPLPGDVTHVGYGDVDALAAAVDDHT--AAVFLEPIMGESGVVVPPAGYLAAARDITARRGALLVLDEVQTGMGRTGAFFAHQHDGITPDVVTLAKGLGGG-LPIGACLAVGPAAELLTPG-LHGSTFGGNPVCAAAALAVLRVLASDGLVRRAEVLGKSLRHGIEALGHPLIDHVRGRGLLLGIALT---APHAKDAEATARDAGYLVNAAAP-DVIRLAPPLIIAEAQLDGFVAALPAILDRAVGAP |
| 2OAT Chain:A ((36-439)) | -GPPTSD--DIFEREYKYGAHNY--HPLPVALERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALK-SQVDKL--TLTSRAFYNNVLGEYEE-YITKLF--NYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTS-YDGFGPFMPGFDIIPYNDLPALERALQDP-NVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKP-GEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLPSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTH-GDIIRFAPPLVIKEDELRESIEIINKTILSF---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OAT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -258708 for 3260 contacts (-79.4/contact) +
2D Compatibility (PS) -42751 + (NN) -26386 + (LL) 480
1D Compatibility (HY) -27600 + (ID) 6500
Total energy: -361465.0 ( -110.88 by residue)
QMean score : 0.536
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