Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRHFLRDDDLSPAEQAEVLELAAELKKDP--V-SRRPLQGPRGVAVIFDKNSTRTRFSFELGIAQLGGHAVVVDSGSTQLGRDETLQDTAKVLSRYVDAIVWRTFGQERLDAMASVATVPVINALSDEFHPCQVLADLQTIAERKG---ALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTWTSMGQEN-DGLDRVK-PFRPFQLNSRLLALADSDAIVLHCLPAHRGDEITDAVMDGPASAVWDEAENRLHAQKALLVWLLERS |
| 4A8T Chain:A ((23-333)) | MKRDYVTTETYTKEEMHYLVDLSLKIKEAIKNGYYPQLLKN-KSLGMIFQQSSTRTRVSFETAMEQLGGHGEYLAPG-IQLGGHETIEDTSRVLSRLVDILMARVERHHSIVDLANCATIPVINGMSDYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDAT-QVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDA-SSVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCLPATRGEEVTDEVIDGKNSICFDEAENRLTSIRGLLVYLMND- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192830 for 2640 contacts (-73.0/contact) +
2D Compatibility (PS) -33708 + (NN) -24846 + (LL) -232
1D Compatibility (HY) -24000 + (ID) 5400
Total energy: -281016.0 ( -106.45 by residue)
QMean score : 0.634
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