Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNSRAPRNLAVSSPSAQVTGRMVQNGENLFQFRREGPQVQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAVKDIEALKTGAIGYEPADITDEEQTLRVVDAATAWHGRLHGVVHCAGGSQTIGPITQIDSQAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHMMKLAADELGPSWVRVNSIRPGLIRTDLVVPVTESPELSADYRVCTPLPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSPMLEPVFGADGLRGVVG |
4J2H Chain:A ((6-256)) | --------------------------------------PIFDLSGRRALVTGASRGIGQSIAVALAEAGAHVAVTARTVEGLAETRALIEK-TGRRAVALAQDVRDVEACASVTRAAAEGLGGLDILVNNAGFEN-VRPSFDVDEALWDTIVSTNLKGAFFCAQAAGRIMADANGGAIVNLCSLTSYVGIPTAVPYGASKSGLLGVTRALATEWAAHNIRVNAIAPGYFRTAMTAGFYEDEDWQSRMLEKIPQRRFGKESDIGGVAVFLCSDAAAYITGHCIPADGGYLAS----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J2H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169524 for 2204 contacts (-76.9/contact) +
2D Compatibility (PS) -26821 + (NN) -12828 + (LL) 2528
1D Compatibility (HY) -9600 + (ID) 3750
Total energy: -219995.0 ( -99.82 by residue)
QMean score : 0.529
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