Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQLPRVGLGTDVHPIEPGRPCWLVGLLFPSADGCAGHSDGDVAVHALCDAVLSAAGLGDIGEVFGVDDPRWQGVSGADMLRHVVVLITQHGYRVGNAVVQVIGNRPKIGWRRLEAQAVLSRLLNA---PVSVSATTTDGLGLTGRGEGLAAIATALVVSLR
1W55 Chain:A ((208-366))
--FEIFTGNGFDVHEFGENRPLLLAGVQIHPTMGLKAHSDGDVLAHSLTDAILGAAGLGDIGELYPDTDMKFKNANSMELLKQAYDKVREIGFELINIDICVMAQSPKLKDFKQAMQSNIAHTLDLDEFRINVKATTTEKLGFIGRKEGMAVLSSVNLKYF-
General information:
TITO was launched using:
RESULT:
Template:
1W55.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132973 for 1282 contacts (-103.7/contact) +
2D Compatibility (PS) -17674 + (NN) -14267 + (LL) 228
1D Compatibility (HY) -7200 + (ID) 2550
Total energy: -174436.0 ( -136.07 by residue)
QMean score : 0.417
(partial model without unconserved sides chains):
PDB file :
Tito_1W55.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W55-query.scw
PDB file :
Tito_Scwrl_1W55.pdb
: