Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHRSPLAWLRLLLAAVLGAFLLGGPLHAAETAATRSPAWAQAVDPSINLYRMSPTLYRSALPNAQSVALLQRLQVKTVVSFIKDDDRA-----WLGQAPVRVLSLPTHADRVD--DAEVLSVLRQLQAAE--REGPVLMHCKHGNNRTGLFAAMYRIVVQGWDKQAALEEMQHGGFGDEDDMRDASAYVRGADVDGLRLAMANGECSPSRFAVCHVREWMAQALDRP
2PQ5 Chain:A ((33-188))
-----------------------------------RLLWVRQAATLNHIDEVWPSLFLGDAYAARDKSKLIQLGITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADDNPFFDLSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMIYENMTLVEAIQTVQAHRN-IC-PNSGFLRQLQVLD----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2PQ5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66779 for 1210 contacts (-55.2/contact) +
2D Compatibility (PS) -16091 + (NN) -10731 + (LL) 5448
1D Compatibility (HY) -8000 + (ID) 1150
Total energy: -97303.0 ( -80.42 by residue)
QMean score : 0.469
(partial model without unconserved sides chains):
PDB file :
Tito_2PQ5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PQ5-query.scw
PDB file :
Tito_Scwrl_2PQ5.pdb
: