Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKG-------TVGHSFKHWP---KSTRTITPSFTSNGF-GMPDMNAISMDTSPAFTFNEEHISGETYAEYL----QVVANHYELNIFENTVVTNISADDAYYTIATTT---ETYHADYIFVATGDYNFP-KKP---FKYGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDS--GQSVHTPHEPILATGFDATKNPI-VQQ-LFVTTN-QDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQREGLPAKQEVIENYQKNQMYLDDYSCCEVSCTC |
| 3LAD Chain:A ((1-344)) | SQKFDVIVIGAGPGGYVAAIKSAQLGL-KTALIEKYKGKEGKTALGGTCLNVGCIPSKA-LLDSSYKFHEAHESFKLHGIST-GEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGK-LLA--GKKVEVTAADGSSQVLDTENVILASGSKPVEIPPAPVDQDVIVDSTGALDFQN-VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP-AVD------EQVAKEAQKILTKQ-GLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCA-TSVPGVYAIGDVVRGAM----LAHKASEEGVVVAERIAGHK------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LAD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169668 for 2582 contacts (-65.7/contact) +
2D Compatibility (PS) -34209 + (NN) -11575 + (LL) 2980
1D Compatibility (HY) -12800 + (ID) 2500
Total energy: -227772.0 ( -88.22 by residue)
QMean score : 0.372
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