Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMNEIIAVANQKGGVGKTTTAVNLAASLAAHEKKILLIDFDPQANATSSLGFRRD--KIDYDIYHVLIGRKQISQVILKTQMPFLDLVPSNLGLAGFEKTFYDSQDENKRGELMLKNALGSVVKLYDYIIIDSPPALGPLTINSLSAAHSVIIPIQCEFFALEGTKLLLNTIRMLQKSTNPKLKIRGFLPTMHVPQLNLTKGVLAELFKYF--DSEFFRDSATGEYIMIPKSVKLAESPSFGKPILLYDIKSNGSIAYQKLAQSILQG |
2OZE Chain:A ((35-288)) | -EAIVILNNYFKGGVGKSKLSTMFAYLTDKLNLKVLMIDKDLQATLTKDLAKTFKVELPRVNFYEGLKNG-NLASSIVH-LTDNLDLIPGTFDLMLLPKLTRSW--TFENESRLLATLLAPLKSDYDLIIIDTVPTPSVYTNNAIVASDYVMIPLQAEEESTNNIQNYISYLIDLQEQFNPGLDMIGFVPYLVDTDSATIKSNLEELYKQHKEDNLVFQN-------IIKRSNKVSTWSKNGITEHKGYD-KKVLSMYKNVFFEMLER |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OZE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151741 for 2063 contacts (-73.6/contact) +
2D Compatibility (PS) -25956 + (NN) -6690 + (LL) 828
1D Compatibility (HY) -7600 + (ID) 3200
Total energy: -194359.0 ( -94.21 by residue)
QMean score : 0.423
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