Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------MKPIFAVGDVHGEITLLDELLE---------NWDKERERLLFVGDLIDRGENPAAVLRRVKALADQTGA-----IVLKGNHEQMLLDFLENPSGKMHYYLSQGGMETIQSLIADSLDKKMTPEGLAKRVKEEASELIDFIRKLPLYYEEGKYVFVHAGV-----------------------DLTKKDWHDTEERDFFWIREPFLFGQNKTGKVFIFGHTPVQNLHIDESSGIWV-----------SEDKTRLDIDGGAVFGGELHGVVVEEKVITKSFSVKK----- |
| 1V73 Chain:A ((6-336)) | TEFDGPYVITPISGQSTAYWICDNRLKTTSIEKLQVNRPEHCGDLPETKLSSEIKQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDAGGMVHLLMGNHEQMVLG---------------GDLRYVHQRYDIATTLINRP---YNKLYGADTEIGQWLRSKNTIIKINDVLYMHGGISSEWISRELTLDKANALYRANVDASKKSLKADDLLNFLFFGNGPTWYRGYFS---ETFTEAELDTILQHFNVNHIVVGHTSQERVLGLFHNKVIAVDSSIKVGKSGELLLLENNRLIRGLYDGTRETLQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75821 for 1619 contacts (-46.8/contact) +
2D Compatibility (PS) -23396 + (NN) -7475 + (LL) 952
1D Compatibility (HY) -14800 + (ID) 2150
Total energy: -122690.0 ( -75.78 by residue)
QMean score : 0.402
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