Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKMKNFKRRFSLSVPRTETIEESLAEFTEQFNQLHNRRNENLQLGPLGRDPPQECSTFSPTDSGEEPGQLSPGVQFQRRQNQRRFSMEDVSKRLSLPMDIRLPQEFLQKLQMESPDLPKPLSRMSRRASLSDIGFGKLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDLIHT------DRSLTLVFEYLDSDLKQYLDHC---GNLMSMHNVKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINER-GELKLADFGLARAKS--VPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCIHYEMATGRPLFPGSTVKEELHLIFRLLGTPTEETWPGVTAFSEFRTYSFPCYLPQPLINHA-PRLDTDGIHLLSSLLLYESKSRMSAEAALSHSYFRSLGERVHQLEDTA---SIFSLKEIQLQKDPGYRGLAFQQPGRGKNRRQSIF |
| 1J1B Chain:A ((54-374)) | -------------------------------------------------------------------------------------------------------------------------------------------VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM--NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175141 for 2394 contacts (-73.2/contact) +
2D Compatibility (PS) -31437 + (NN) -6765 + (LL) 7904
1D Compatibility (HY) -28000 + (ID) 4750
Total energy: -238189.0 ( -99.49 by residue)
QMean score : 0.381
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