Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDDAAVLKRRGYLLGINLGEGSYAKVKSAYSERLKFNVAIKIIDRKKAP-ADFLEKFLPREIEILAMLNHCSIIKTYEIFETSHGKVYIVMELAVQGDLLELIKT---------------R--------------GA---------LHEDEARKKFHQLSLAIKYCHDLDVVHRDLKCDNLLLDKD--FNIKLSDFSFSKRCLRDDSGRMALSKTFCGSPAYAAPEVLQGI--PYQPKVYDIWSLGVILYIMVCGSMPYDDSNIKKMLRIQKEHRVNF--PRSKHLTGECKDLIYHMLQPDVNRRLHIDEILSHCWMQPKARGSPSVAINKEGESSRGTEPLWTPEPGSDKKSATKLEPEGEAQPQAQPETKPEGTAMQMSRQSEILGFPSKPSTMETEEGPPQQPPETRAQ |
| 3HKO Chain:A ((26-336)) | ---------KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQ-KDVERI-KTEVRLMKKLHHPNIARLYEVYEDE-QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG--------AGTPYFVAPEVLNTTNESYGPK-CDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSDKIYKMS------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147152 for 1963 contacts (-75.0/contact) +
2D Compatibility (PS) -27346 + (NN) -13735 + (LL) 4756
1D Compatibility (HY) -18400 + (ID) 3950
Total energy: -205827.0 ( -104.85 by residue)
QMean score : 0.478
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