Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRSISCSKEYAEDVRNLNIRPEQLDDFFGQKDLIQ---NLKVFINAAKTRTEALDHVLLHGPPGLGKTTLAQIISKELRVSFRATSGPLLNKAGDLAAVLTT------LNAKDVLFIDEIHRLNRSIEEVLYTAMEDFCLDLLVGEGPSTRTLRIDLPPFTLVGATTRL--GLLSAPLRDRFGIPLRLEFYSFEELVDIIKRGTKV-------FSAEIEEDAIQEIACRARGTPRIALRLLRRIRDFVEVKD--NKKITHKIADSALSKLGIDKMGLNKLDVDYLRFLFNTSGSVGIDTISIALSEDSGNIEETVEPYLVKISFVKRTPRGRVLTDQGKEYLSLQY |
3PVS Chain:A ((14-243)) | ------------QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEA-----GHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSG-VKEIREAIERARQNRNAGRRTILFVDEVHRF------AFLPHIEDG--------------------TITFIGATTENPSFELNSALLSRAR-VYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PVS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119415 for 1495 contacts (-79.9/contact) +
2D Compatibility (PS) -21540 + (NN) -2984 + (LL) 3012
1D Compatibility (HY) -8000 + (ID) 2700
Total energy: -151627.0 ( -101.42 by residue)
QMean score : 0.433
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