Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIRVGINGLGRIGRSVLRAIHEVGKYNEQIEVVAVNGS-LSTEQHAHLIRYDSVHGKFNGDIGFNESENWISTNGKKFSLYRERNPENIPWD---VDVVLECTGAFNKRAEAAKHNT-G--KVIVSAPVSDADITIVYGVNNDMLKK-EHKVISAGSCTTNCLAPVVKVLHFNLDMKSGFMTTVHAYTNDQNVLDGNH--RDLRRARACGLSIVPTTTGAAKTIGSVIPELKGKLDGTAIRVPVANVSMVDLKFTTDKKVTAKEINEIFKNSVN----DVLSICKEPLVSIDFVHNPYSAIVDLAGTYVTG-DICRVAAWYDNEWAFSLRMLDIALLCYNRI |
| 3CPS Chain:A ((18-352)) | --GTLGINGFGRIGRLVLRACMER----NDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEV-S-G-DLCINGKVVKVFQAKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNCLAPLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKG-DWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASNGPMKGIMGYTSDDVVSTDFIGCKYSSIFDKNACIALNDSFVKLISWYDNESGYSNRLVDLAVYVASRG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CPS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -249228 for 2782 contacts (-89.6/contact) +
2D Compatibility (PS) -33409 + (NN) -5765 + (LL) 88
1D Compatibility (HY) -27200 + (ID) 6700
Total energy: -322214.0 ( -115.82 by residue)
QMean score : 0.501
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