Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDHSTSYGLITNIRPSPSWLSKLSFWRKKTLLISQFRTSVALYVNENNHILNAIKGSSLSKILDRVNIRDKDGLSALHLTVKGGNVNIVKLLLDGGAEPNIRSWMNLTTPLHNAVLNNRVYIVKLLFDSHANSNILSRSDISPLYFAVVNN
3V30 Chain:A ((35-145))
-------------------------------------RGFTPLIWASAFGEIETV--RFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYD-WNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALG
General information:
TITO was launched using:
RESULT:
Template:
3V30.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30156 for 918 contacts (-32.8/contact) +
2D Compatibility (PS) -11754 + (NN) -4334 + (LL) 2500
1D Compatibility (HY) -5200 + (ID) 1650
Total energy: -50594.0 ( -55.11 by residue)
QMean score : 0.403
(partial model without unconserved sides chains):
PDB file :
Tito_3V30.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3V30-query.scw
PDB file :
Tito_Scwrl_3V30.pdb
: