Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKKTFTIIDGYGFLFGAYYVLHHLTTTTGMPIGAVYGFLNMVLKYITHSDYLTIALDSGKKNFRHDLYPEYKANRVTPPEGLIPQFTILREAIEAFNLSYEEIEGYEADDIIATLTAKYANHQDLKVVIISSDKDLFQLLNYDVLIFDPIKNIYIDEKQVIEKFGVNSNKLLDLFSLTGDVSDNIPGVPGIGPKTAAKLLDRFNSLNNTIENINNIKQTRTRNILTEHKEKALISRKLLSLCEKVDLQHDVIKYKVLSPNMEKLLSFLKKYEFNSLIGKVEKLFSYNESSTKERTEYSSEALEKFLECCRYEGKVAIHCHFENNVLSKISLSYNEDNIFYIDQNRSQDALITINSALFSNGILKIIHDTRETRKTIPTIEKVLGSVDDLMIMSYSLDTGKHDHSIPNIIAHNLSENVETFSAKTLIAIHEKLKQRLFKEKLFTIYERFDKPLMKVIFNMEKNGILLNIHKLQELSDKFQQLIAVLENDIYNLAGEKFNIASPKQLSDVLFNKMGLNKKKKLKS-GSYSTNSVVLEELEIEGVEIASKILDWRHLSKLKSTYTDALIKQVDPLDGRIHTNFSTTVTATGRLSSSSPNLQNIPIRSKEGNLIRQTFIAPK-GYKIISADYSQIELRLLAHVANVT-AFKEAFANGKDIHGITAGQVFGVQKDMEVDEQLRRKAKSINFGIMYGISQFGLAKRLGITIEEAAEYINYYFSCYPEIKVYMEKVVSTARQHGYVETLFGRRCFVKDINNTIPYLRQFAERAAINAPLQGTAADIIKCAMIQLFDQLKAG--KIILQVHDELLVEV-ENEKVQETAKLMKDVMENIVK-ISIPLEVEVKISDNWGTTTQTL |
| 3KTQ Chain:A ((1-539)) | ----ALEEAP--------------WPPP----EGAFVGFVLSRKEPMWA-DLLALAAARG-G-RVHRAP------------EPYKALRDLK------------------------------------------EARGLLAK-DLSVLALRE-------GLGLP---PGDDPMLLAYLLD----------PS--NTTPEGVARRYG--GEW--------------------------------------------------------------TE------------------------------------------------------------------------------------------------------------------------EAGERAALSERLFANLWGRLEG----------------------EERLLWLYREVERPLSAVLAHMEATGVRLDVAYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPAIGKTEKTGKRSTSAAVLEALR-EAHPIVEKILQYRELTKLKSTYIDPLPDLIHPRTGRLHTRFNQTATATGRLSSSDPNLQNIPVRTPLGQRIRRAFIAE-EGWLLVALDYSQIELRVLAHLSGD-ENLIRVFQEGRDIHTETASWMFGVPREA-VDPLMRRAAKTINFGVLYGMSAHRLSQELAIPYEEAQAFIERYFQSFPKVRAWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVREAAERMAFNMPVQGTAADLMKLAMVKLFPRLEEMGARMLLQVHDELVLEAP-KERAEAVARLAKEVMEGVY-PLAVPLEVEVGIGEDWLSAK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KTQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -259904 for 4513 contacts (-57.6/contact) +
2D Compatibility (PS) -56612 + (NN) -13865 + (LL) 22972
1D Compatibility (HY) -37600 + (ID) 10050
Total energy: -355059.0 ( -78.67 by residue)
QMean score : 0.436
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