Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPLLSLKSVSKSYDDLNILDDIDIDIESGYFYTLLGPSGCGKTTILKLIAGFEYPDSGEVIYQNKPIGNLPPNKRKVNTVFQDYALFPHLNVYDNIAFGLKLKKLSKTEIDQKVTEALKLVKLSGYEKRNINEMSGGQKQRVAIARAIVNEPEILLLDESLSALDLKLRTEMQYELRELQSRLGITFIFVTHDQEEALALSDFLFVLKDGKIQQFGTPTDIYDEPVNRFVADFIGES--NIVEGRMVRDYVVNIYGQDFECVDM----GIPENKKVEVVIRPEDISLIKAE----EGLFKATVDSMLFRGVHYEICCIDNKGYEWVI--QTTKKAEVGSEVGLYFDPEAIHIMVPGETEEEFDKRIESYEEVDNA |
| 1V43 Chain:A ((10-370)) | -MVEVKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPKDRNISMVFQ------HMTVYENIAFPL--KKFPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRPNSVFVATFIGAPEMNILEVSVGDGYL-EGRGFRIELPQ-MDLLKDYVGKTVLFGIRPEHMTVEGV-HMKRTARLIGKVDFVEALGTDTILHVKFGDE-LVKVKLPGHIPIEPGREVKVIMDLDMIHVFDKDTEK---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V43.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204372 for 2627 contacts (-77.8/contact) +
2D Compatibility (PS) -37412 + (NN) -19717 + (LL) 2560
1D Compatibility (HY) -27200 + (ID) 6250
Total energy: -292391.0 ( -111.30 by residue)
QMean score : 0.569
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