Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQTVNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNALTNGVGVLKEEMRRLN-----SIIIEAAD---KAR-----V---PAGGALAVDRHDFSGYITETLKNHENITVINEE-I----------------------NAIPDGYTIIATGPLTTETLAQEIVDITGKDQLYFYDAAAPIIEKESIDMDKVYLKSRYDKGEAAYLNCPMTEDEFNRFYDAVLEAEVAPVNSFEKEKYFEGCMPFEVMAERGRKTLLFGPMKPVGLEDPKTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIKLIPGLENVDIVRYGVMHRNTFINSPDVLNEKYELISQPNIQFAGQMTGVEGYVESAASGLVAGINLAHKILGKGEVVFPRETMIGSMAYYISHAKNNKNFQPMNANFGLLPSLETRIKDKKERYEAQANRALDYLENFKKTL |
| 3E1T Chain:A ((6-235)) | EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQ------IGESLLPATVHGICA--MLGLT-DEMKRAGFPIKRGGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERK-GVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRTR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E1T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48758 for 936 contacts (-52.1/contact) +
2D Compatibility (PS) -13485 + (NN) 2198 + (LL) 20524
1D Compatibility (HY) -3600 + (ID) 1450
Total energy: -44571.0 ( -47.62 by residue)
QMean score : 0.427
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