Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIGIPREIKNNENRVGLSPSGVHALVESGHTVLVETNAGSGSFFEDVDYKEAGAEIVAEQAKVW-DVDMVIKVKEPLES-EYPYFKEGLVLFTYLHLANEEKLTQALIDRKVISIAYETVQLPDRSSPLLSPMSEVAGRMSAQVGAEFLQKLNGGMGILLGGVPGVPKGKVTIIGGGQAGTNAAKIALGLGADVTILDVNPKRLQQLDDLFGGRVHTI---MSNPLNIELYVKQSDLVIGAVLIPGAKAPRLVTEDMIKQMKNGSVIIDIAIDQGGIFETTDKITTHDDPTYIKHGVVHYAVANMPGAVPRTSTLALNNATLPYALMLANK--GYREAFKSNQPLSLGLNTYKGHVTNKGVAEAFEMEYKSVEEALQL |
| 1PJC Chain:A ((1-361)) | MEIGVPKEIKNQEFRVGLSPSSVRTLVEAGHTVFIETQAGIGAGFADQDYVQAGAQVVPSAKDAWS-REMVVKVKEPLP-AEYDLMQKDQLLFTYLHLAAARELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQFGARFLERQQGGRGVLLGGVPGVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSN---SAEIETAVAEADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHP-TSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTLPYVVKLANQGL---KALETDDALAKGLNVQAHRLVHPAVQ-QVFPDLA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PJC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216672 for 3063 contacts (-70.7/contact) +
2D Compatibility (PS) -38749 + (NN) -13178 + (LL) 1312
1D Compatibility (HY) -36000 + (ID) 9550
Total energy: -312837.0 ( -102.13 by residue)
QMean score : 0.548
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