Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIRKIAIAALSVVVAGSLLTACGGGNSKSDDNGKTKVTFWAAPNPTQVKYWDEMAKAYEKENPDVTIEVSQMKESPSSEATIQSAIASKTAPTMSENINRSFAAQLADSKAIVPLNDVKGLDDVVKERNMSETMDSWKFSDGNQYVLPVYSNPILFAWRLDTLKELGYDAPPKTYSEALEVGKKLKAKYPDKVLWAKGDLSDPTAWMRWFDFFPLYDAASKG-NAFVE---DGKLVADDKAGTELLTFMSELQKNKLLLAS-------KATDPFETGTSIMADNGPWTFPNWDEKFPELKYNENYAITAPLVPDSMVNEENVATYADSKGVVMYAQA--TDKEKEAAMDFLKFVYNDDKNDLKFLETTNLIPARDDATENETFTAFFKENPELEVYAANVPY-SIPAMDDAKYNDIQQIIGEEAWNPIVRGEKKPTKAWSDMKKAEDGVLQE |
| 3QUF Chain:A ((27-411)) | --------------------------------GGKTKISFYSYFK---DNQIGEVVKGFEKKNPDITLDVQYGQDPAQYISTLQTRLAGGKPPTIFN-LTMDNRTDVMKSGAALDISGEDFLDG-----IDDTNFALFQQ-DGKTYGMPVSAWVGAFFYNKDILKKAGYDKFPKTWDEFIEMGKKINSNGST--AFLEDF--NTQIAGSFTGLLASYYGEQGKSGDLDADIWSGKSTFTKD-WTPVFKRWEAAAKAGVIPQKSVGLSADQVKQEFVSGNLGVMRSGPWDLPDLQKS----D--IDFGVAPFPAYSKED--GQWINGGPDQGFAIASRASDKE--KAAAKKFLAYLNSEE-GLEAFTSAAGTLSLSSKYNAEPP--AEL--KDVVDNYFKQNKFYWVNWPKSPT--VMSTEGIA-QQQKIVQGQISAKDAAKALDAKWATL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QUF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82220 for 3171 contacts (-25.9/contact) +
2D Compatibility (PS) -39607 + (NN) -18337 + (LL) 4544
1D Compatibility (HY) -8000 + (ID) 3400
Total energy: -147020.0 ( -46.36 by residue)
QMean score : 0.444
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