Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLGKVITAMVTPIHPEKDKVCKKRIHHLVNHLIKNGSDGLVIAGTTGESPTLSHDEKIKLFRQVIETNDGRAKLIAGTGSNNTAETIAFTKEVATLGGMDAVLIVAPYYNKPNQDGLYAHFAAVAEASDLPVVIYNIPGRSVVNIEPETIIRLAKLPNIVGVKESSGNLDNISKIIAETSDDFQVYSGDDSLTLPILAVGGNGVISVASHIVGNEMQEMIQAFERGEVQKAAQIHRELLPLMNGLFSVPNPAPTKYLLNQQGISVGPVRLPLVDLNAEQGTKLQAILEGLSK |
2RFG Chain:A ((1-288)) | -MFRGSLIAMITPFI-N-GQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQA-GADAVLCVAGYYNRPSQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARLAALPRIVGVKDATTDLARISRERMLINKPFSFLSGDDMTAIAYNASGGQGCISVSANIAPALYGQMQTATLQGDFREALRIHDLLAPLHEALFREPSPAGAKYAASLLGLCNEECRLPIVPLSEQTKSDIKNIINELY- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RFG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162622 for 2643 contacts (-61.5/contact) +
2D Compatibility (PS) -32317 + (NN) -21494 + (LL) 24
1D Compatibility (HY) -20400 + (ID) 5900
Total energy: -242709.0 ( -91.83 by residue)
QMean score : 0.579
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