Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MERNEVLKKVEAAM----PNARFKHTLGVEKAAVELAEHYH-MDVEKARITALLHDYAKYYDDDKARKIIEDEGYDPRLLSFHHSLWHAPVGAYLAEKEFGITD---TEILEAIRLHTTGSA--TMSDFDKLIYLADYTEQGRTFPGVYKARRLALKSLDEAMLFALSNTITHLVKKQQLVFPDTLDAYNYFVNLNLEGDY |
| 2QGS Chain:A ((7-127)) | --IKKAYEYMKSFHQHDTTGHDIAHVERVYNNACYIAKRENITDTLVIELSSLLHDTVDSKLTDE--------------------ILAYDQLKQFLST-LDLSSEISQQVLYIIKHMS----HVKLSIDGEIVRDADRLDA------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2QGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -35061 for 737 contacts (-47.6/contact) +
2D Compatibility (PS) -11561 + (NN) -8638 + (LL) 5916
1D Compatibility (HY) -1600 + (ID) 750
Total energy: -51694.0 ( -70.14 by residue)
QMean score : 0.621
|
|
|