Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LDKTKRKMIYETFMLILILLSLALLPYRNNFTFILNWIIWVIFTLDYLVRLYRADNKWHYVKTHPFQLIAIIPFYGGFRAARIVSFVHLLSITAMGRRYIVPIYSFFRSNGLNRFLMIFVLLVIIIPVPMVFIEP-----EINNYPDALWWAIVTATTVGYGDIVPVTPIGRILASIMMLFGIAFIGMITSTITNFFRAKKPTNSSTQRANKITQLISETPDLTKEEIAVVEQFLTLRKKELADENTKSDSE |
1K4C Chain:C ((22-124)) | --------------------------------------------------------------------------------------------------------SALHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLYPVTLWGRCVAVVVMVAGITSFGLVTAALATWFVGREQERRGH--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K4C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88143 for 651 contacts (-135.4/contact) +
2D Compatibility (PS) -10034 + (NN) 283 + (LL) 14172
1D Compatibility (HY) -10400 + (ID) 1550
Total energy: -95672.0 ( -146.96 by residue)
QMean score : 0.248
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