Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-MRKPIIAGNWKMNKTAAKAGQFAEDVKNNVPSSDAVESVVAAPALFLQELVRLTEGTDLRVSAQNCYFEDEGAFTGEISPFALADLGVSYVIIGHSERREYFHETDEDINKKAHAIFKHGMTPIICCGETLDQREAGQTDTWVRGQIRAALAGLTEEQVIKSVIAYEPIWAIGTGKSSTSADANETCAVIRAEVADAVSQKAADAVRIQYGGSVKPENIADYLAESDIDGALVGGASLEPASFLALLEAVK
1IF2 Chain:A ((3-251))AKPQPIAAANWKCNGTTASIEKLVQVFNEHTISHD-VQCVVAPTFVHIPLVQAKLRNPKYVISAQNAI-AKSGAFTGEVSMPILKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSAIAAKLTKDAWNQVVLAYEPVWAIGTGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANAATLYAKPDINGFLVGGASLKP-EFRDIIDATR


General information:
TITO was launched using:
RESULT:

Template: 1IF2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96622 for 2114 contacts (-45.7/contact) +
2D Compatibility (PS) -27154 + (NN) -13203 + (LL) 420
1D Compatibility (HY) -16800 + (ID) 5250
Total energy: -158609.0 ( -75.03 by residue)
QMean score : 0.518

(partial model without unconserved sides chains):
PDB file : Tito_1IF2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1IF2-query.scw
PDB file : Tito_Scwrl_1IF2.pdb: