Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTVKVGINGFGRIGRLAFRRIQNVEGIEVVAINDLT-DAKMLAHLLKYDTTQGRFDGEVEVHDGFFKVNGKEVKVLANRNPEELPWGDLGVDIVLECTGFFTAQDKAELHIKAGAKKVVISAPATGDMKTIVYNVNHETLDGTETVISGASCTTNCLAPMAKVLEDKFGVVEGLMTTIHAYTGDQNTLDAPHPKGDFRRARAAAENIIPNTTGAAKAIGEVLPTLKGKLDGAAQRVPVPTGSLTELVTVLDKKVTVDEVNAAMEAASDPE---TFGYTSDQVVSSDIKGMTFGSLFDETQTKVLTVGDQQLVKTVAWYDNEMSYTAQLVRTLEYFAKIAK
3PYM Chain:A ((1-331))-MVRVAINGFGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSHDDKHIIVDGKKIATYQERDPANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSST-APMFVMGVNEEKYTSDLKIVSNASCTTNCLAPLAKVINDAFGIEEGLMTTVHSLTATQKTVDGPSHK-DWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDVSVVDLTVKLNKETTYDEIKKVVKAAAEGKLKGVLGYTEDAVVSSDFLGDSHSSIFDASAGIQL---SPKFVKLVSWYDNEYGYSTRVVDLVEHVAK---


General information:
TITO was launched using:
RESULT:

Template: 3PYM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -171354 for 2852 contacts (-60.1/contact) +
2D Compatibility (PS) -35585 + (NN) -14644 + (LL) 444
1D Compatibility (HY) -26000 + (ID) 7800
Total energy: -254939.0 ( -89.39 by residue)
QMean score : 0.513

(partial model without unconserved sides chains):
PDB file : Tito_3PYM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PYM-query.scw
PDB file : Tito_Scwrl_3PYM.pdb: